Gunaratne, Gemunu
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research areas: Models, Biological
research areas: Gene Regulatory Networks
research areas: Bone and Bones
research areas: RNA Splicing
research areas: RNA
mailing address: https://profilesrns.times.uh.edu/profile/173684
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Bone and Bones
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RNA
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RNA Splicing
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Modeling novelty habituation during exploratory activity in Drosophila.
PubMed Identifier: 23597866
author list: Soibam B, Shah S, Gunaratne GH, Roman GW
published in: Behavioural processes
information resource reference: Modeling novelty habituation during exploratory activity in Drosophila. Behav Processes. 2013 Jul; 97:63-75.
journal title abbreviation: Behav Processes
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Modeling Drosophila positional preferences in open field arenas with directional persistence and wall attraction.
PubMed Identifier: 23071591
author list: Soibam B, Goldfeder RL, Manson-Bishop C, Gamblin R, Pletcher SD, Shah S, Gunaratne GH, Roman GW
published in: PloS one
information resource reference: Modeling Drosophila positional preferences in open field arenas with directional persistence and wall attraction. PLoS One. 2012; 7(10):e46570.
journal title abbreviation: PLoS One
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Bassler, Kevin
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Fox, George
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Biochemistry
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Cell and Molecular Biology
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Rutgers University
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EBRAINS
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Metaxas, Dimitris
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Using effective subnetworks to predict selected properties of gene networks.
PubMed Identifier: 20949025
author list: Gunaratne GH, Gunaratne PH, Seemann L, T?r?k A
published in: PloS one
information resource reference: Using effective subnetworks to predict selected properties of gene networks. PLoS One. 2010 Oct 08; 5(10):e13080.
journal title abbreviation: PLoS One
publication date: 2010-10-08T00:00:00
year: 2010
type: Academic Article
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A theory for the arrangement of sensory organs in Drosophila.
PubMed Identifier: 20370287
author list: Zhu H, Gunaratne PH, Roman GW, Gunaratne GH
published in: Chaos (Woodbury, N.Y.)
information resource reference: A theory for the arrangement of sensory organs in Drosophila. Chaos. 2010 Mar; 20(1):013132.
journal title abbreviation: Chaos
publication date: 2010-03-01T00:00:00
year: 2010
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Mouse let-7 miRNA populations exhibit RNA editing that is constrained in the 5'-seed/ cleavage/anchor regions and stabilize predicted mmu-let-7a:mRNA duplexes.
PubMed Identifier: 18614752
author list: Reid JG, Nagaraja AK, Lynn FC, Drabek RB, Muzny DM, Shaw CA, Weiss MK, Naghavi AO, Khan M, Zhu H, Tennakoon J, Gunaratne GH, Corry DB, Miller J, McManus MT, German MS, Gibbs RA, Matzuk MM, Gunaratne PH
published in: Genome research
information resource reference: Mouse let-7 miRNA populations exhibit RNA editing that is constrained in the 5'-seed/ cleavage/anchor regions and stabilize predicted mmu-let-7a:mRNA duplexes. Genome Res. 2008 Oct; 18(10):1571-81.
journal title abbreviation: Genome Res
publication date: 2008-07-09T00:00:00
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type: Academic Article
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Models, Biological
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MeSH semantic group name: Devices
number of authors: 74
number of publications: 131
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type: Concept

Gene Regulatory Networks
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University of Houston
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Authorship 11271
type: Authorship
author rank in publication: 8
linked author: Gunaratne, Gemunu
linked information resource: Network modulation at stable states.

Authorship 11272
type: Authorship
author rank in publication: 2
linked author: Gunaratne, Gemunu
linked information resource: On a kneading theory for gene-splicing.

Authorship 11273
type: Authorship
author rank in publication: 2
linked author: Gunaratne, Gemunu
linked information resource: Imaging in reflecting spheres.

Authorship 11274
type: Authorship
author rank in publication: 2
linked author: Gunaratne, Gemunu
linked information resource: Cell biology: How to short-circuit the cell cycle.

Authorship 11275
type: Authorship
author rank in publication: 7
linked author: Gunaratne, Gemunu
linked information resource: Drosophila increase exploration after visually detecting predators.

Authorship 11276
type: Authorship
author rank in publication: 4
linked author: Gunaratne, Gemunu
linked information resource: Anomalous scaling of stochastic processes and the Moses effect.

Authorship 11277
type: Authorship
author rank in publication: 4
linked author: Gunaratne, Gemunu
linked information resource: Deconvolution of reacting-flow dynamics using proper orthogonal and dynamic mode decompositions.

Authorship 11278
type: Authorship
author rank in publication: 5
linked author: Gunaratne, Gemunu
linked information resource: Controlling networks of nonlinearly-coupled nodes using response surfaces.

Authorship 11279
type: Authorship
author rank in publication: 2
linked author: Gunaratne, Gemunu
linked information resource: Dynamical-systems analysis and unstable periodic orbits in reacting flows behind symmetric bluff bodies.

Authorship 11280
type: Authorship
author rank in publication: 3
linked author: Gunaratne, Gemunu
linked information resource: Modeling novelty habituation during exploratory activity in Drosophila.

Authorship 11281
type: Authorship
author rank in publication: 7
linked author: Gunaratne, Gemunu
linked information resource: Modeling Drosophila positional preferences in open field arenas with directional persistence and wall attraction.

Authorship 11282
type: Authorship
author rank in publication: 3
linked author: Gunaratne, Gemunu
linked information resource: Effective models of periodically driven networks.

Authorship 11283
type: Authorship
author rank in publication: 3
linked author: Gunaratne, Gemunu
linked information resource: A robust topology-based algorithm for gene expression profiling.

Authorship 11284
type: Authorship
author rank in publication: 1
linked author: Gunaratne, Gemunu
linked information resource: Using effective subnetworks to predict selected properties of gene networks.

Authorship 11285
type: Authorship
author rank in publication: 4
linked author: Gunaratne, Gemunu
linked information resource: A theory for the arrangement of sensory organs in Drosophila.

Authorship 11286
type: Authorship
author rank in publication: 3
linked author: Gunaratne, Gemunu
linked information resource: Creating perfectly ordered quantum dot arrays via self-assembly.

Authorship 11287
type: Authorship
author rank in publication: 5
linked author: Gunaratne, Gemunu
linked information resource: Nanostructures with long-range order in monolayer self-assembly.

Authorship 11288
type: Authorship
author rank in publication: 12
linked author: Gunaratne, Gemunu
linked information resource: Mouse let-7 miRNA populations exhibit RNA editing that is constrained in the 5'-seed/ cleavage/anchor regions and stabilize predicted mmu-let-7a:mRNA duplexes.

Authorship 11289
type: Authorship
author rank in publication: 3
linked author: Gunaratne, Gemunu
linked information resource: Nonstationary increments, scaling distributions, and variable diffusion processes in financial markets.

Authorship 11290
type: Authorship
author rank in publication: 2
linked author: Gunaratne, Gemunu
linked information resource: A method for vibrational assessment of cortical bone.

Authorship 11291
type: Authorship
author rank in publication: 5
linked author: Gunaratne, Gemunu
linked information resource: Statistical characterizations of spatiotemporal patterns generated in the Swift-Hohenberg model.

Authorship 11292
type: Authorship
author rank in publication: 2
linked author: Gunaratne, Gemunu
linked information resource: Set of measures to analyze the dynamics of nonequilibrium structures.

Authorship 11293
type: Authorship
author rank in publication: 3
linked author: Gunaratne, Gemunu
linked information resource: A study of age-related architectural changes that are most damaging to bones.

Authorship 11294
type: Authorship
author rank in publication: 7
linked author: Gunaratne, Gemunu
linked information resource: An expression relating breaking stress and density of trabecular bone.

Authorship 11295
type: Authorship
author rank in publication: 2
linked author: Gunaratne, Gemunu
linked information resource: Cellular pattern formation in circular domains.

Authorship 11296
type: Authorship
author rank in publication: 1
linked author: Gunaratne, Gemunu
linked information resource: Estimating the strength of bone using linear response.

Authorship 11297
type: Authorship
author rank in publication: 1
linked author: Gunaratne, Gemunu
linked information resource: Model for bone strength and osteoporotic fractures.

Authorship 11298
type: Authorship
author rank in publication: 2
linked author: Gunaratne, Gemunu
linked information resource: Rhombic patterns: Broken hexagonal symmetry.

Statistical characterizations of spatiotemporal patterns generated in the Swift-Hohenberg model.
PubMed Identifier: 16396591
author list: Hu S, Nathan G, Kouri DJ, Hoffman DK, Gunaratne GH
published in: Chaos (Woodbury, N.Y.)
information resource reference: Statistical characterizations of spatiotemporal patterns generated in the Swift-Hohenberg model. Chaos. 2005 Dec; 15(4):043701.
journal title abbreviation: Chaos
publication date: 2005-12-01T00:00:00
year: 2005
type: Academic Article
type: Article
type: Document
type: Information Resource

Anomalous scaling of stochastic processes and the Moses effect.
PubMed Identifier: 28505751
author list: Chen L, Bassler KE, McCauley JL, Gunaratne GH
published in: Physical review. E
information resource reference: Anomalous scaling of stochastic processes and the Moses effect. Phys Rev E. 2017 Apr; 95(4-1):042141.
journal title abbreviation: Phys Rev E
publication date: 2017-04-28T00:00:00
year: 2017
type: Academic Article
type: Article
type: Document
type: Information Resource

Nonstationary increments, scaling distributions, and variable diffusion processes in financial markets.
PubMed Identifier: 17956981
author list: Bassler KE, McCauley JL, Gunaratne GH
published in: Proceedings of the National Academy of Sciences of the United States of America
information resource reference: Nonstationary increments, scaling distributions, and variable diffusion processes in financial markets. Proc Natl Acad Sci U S A. 2007 Oct 30; 104(44):17287-90.
journal title abbreviation: Proc Natl Acad Sci U S A
publication date: 2007-10-23T00:00:00
year: 2007
type: Academic Article
type: Article
type: Document
type: Information Resource

Model for bone strength and osteoporotic fractures.
PubMed Identifier: 11863854
author list: Gunaratne GH, Rajapaksa CS, Bassler KE, Mohanty KK, Wimalawansa SJ
published in: Physical review letters
information resource reference: Model for bone strength and osteoporotic fractures. Phys Rev Lett. 2002 Feb 11; 88(6):068101.
journal title abbreviation: Phys Rev Lett
publication date: 2002-01-24T00:00:00
year: 2002
type: Academic Article
type: Article
type: Document
type: Information Resource

Network modulation at stable states.
PubMed Identifier: 39562919
author list: Collins B, Shulman J, Speakman E, Martin H, Reiss J, Myers J, Roman G, Gunaratne GH
published in: Physical review. E
information resource reference: Network modulation at stable states. Phys Rev E. 2024 Oct; 110(4-1):044407.
journal title abbreviation: Phys Rev E
publication date: 2024-10-01T00:00:00
year: 2024
type: Academic Article
type: Article
type: Document
type: Information Resource

On a kneading theory for gene-splicing.
PubMed Identifier: 38579148
author list: Speakman E, Gunaratne GH
published in: Chaos (Woodbury, N.Y.)
information resource reference: On a kneading theory for gene-splicing. Chaos. 2024 Apr 01; 34(4).
journal title abbreviation: Chaos
publication date: 2024-04-01T00:00:00
year: 2024
type: Academic Article
type: Article
type: Document
type: Information Resource

Imaging in reflecting spheres.
PubMed Identifier: 36182354
author list: Eckmann JP, Gunaratne GH, Shulman J, Wood LT
published in: Chaos (Woodbury, N.Y.)
information resource reference: Imaging in reflecting spheres. Chaos. 2022 Sep; 32(9):093136.
journal title abbreviation: Chaos
publication date: 2022-09-01T00:00:00
year: 2022
type: Academic Article
type: Article
type: Document
type: Information Resource

Cell biology: How to short-circuit the cell cycle.
PubMed Identifier: 35728525
author list: Goldberg ML, Gunaratne GH
published in: Current biology : CB
information resource reference: Cell biology: How to short-circuit the cell cycle. Curr Biol. 2022 Jun 20; 32(12):R561-R563.
journal title abbreviation: Curr Biol
publication date: 2022-06-20T00:00:00
year: 2022
type: Academic Article
type: Article
type: Document
type: Information Resource

Drosophila increase exploration after visually detecting predators.
PubMed Identifier: 28746346
author list: de la Flor M, Chen L, Manson-Bishop C, Chu TC, Zamora K, Robbins D, Gunaratne G, Roman G
published in: PloS one
information resource reference: Drosophila increase exploration after visually detecting predators. PLoS One. 2017; 12(7):e0180749.
journal title abbreviation: PLoS One
publication date: 2017-07-26T00:00:00
year: 2017
type: Academic Article
type: Article
type: Document
type: Information Resource

Deconvolution of reacting-flow dynamics using proper orthogonal and dynamic mode decompositions.
PubMed Identifier: 25679702
author list: Roy S, Hua JC, Barnhill W, Gunaratne GH, Gord JR
published in: Physical review. E, Statistical, nonlinear, and soft matter physics
information resource reference: Deconvolution of reacting-flow dynamics using proper orthogonal and dynamic mode decompositions. Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Jan; 91(1):013001.
journal title abbreviation: Phys Rev E Stat Nonlin Soft Matter Phys
publication date: 2015-01-06T00:00:00
year: 2015
type: Academic Article
type: Article
type: Document
type: Information Resource

Controlling networks of nonlinearly-coupled nodes using response surfaces.
PubMed Identifier: 25524558
author list: Shulman J, Malatino F, Mo A, Ryan K, Gunaratne GH
published in: Scientific reports
information resource reference: Controlling networks of nonlinearly-coupled nodes using response surfaces. Sci Rep. 2014 Dec 19; 4:7574.
journal title abbreviation: Sci Rep
publication date: 2014-12-19T00:00:00
year: 2014
type: Academic Article
type: Article
type: Document
type: Information Resource

Dynamical-systems analysis and unstable periodic orbits in reacting flows behind symmetric bluff bodies.
PubMed Identifier: 24125348
author list: Hua JC, Gunaratne GH, Kostka S, Jiang N, Kiel BV, Gord JR, Roy S
published in: Physical review. E, Statistical, nonlinear, and soft matter physics
information resource reference: Dynamical-systems analysis and unstable periodic orbits in reacting flows behind symmetric bluff bodies. Phys Rev E Stat Nonlin Soft Matter Phys. 2013 Sep; 88(3):033011.
journal title abbreviation: Phys Rev E Stat Nonlin Soft Matter Phys
publication date: 2013-09-18T00:00:00
year: 2013
type: Academic Article
type: Article
type: Document
type: Information Resource

Effective models of periodically driven networks.
PubMed Identifier: 22261043
author list: Shulman J, Seemann L, Gunaratne GH
published in: Biophysical journal
information resource reference: Effective models of periodically driven networks. Biophys J. 2011 Dec 07; 101(11):2563-71.
journal title abbreviation: Biophys J
publication date: 2011-12-07T00:00:00
year: 2011
type: Academic Article
type: Article
type: Document
type: Information Resource

A robust topology-based algorithm for gene expression profiling.
PubMed Identifier: 25969748
author list: Seemann L, Shulman J, Gunaratne GH
published in: ISRN bioinformatics
information resource reference: A robust topology-based algorithm for gene expression profiling. ISRN Bioinform. 2012; 2012:381023.
journal title abbreviation: ISRN Bioinform
publication date: 2012-11-11T00:00:00
year: 2012
type: Academic Article
type: Article
type: Document
type: Information Resource

Creating perfectly ordered quantum dot arrays via self-assembly.
PubMed Identifier: 19792021
author list: Shi F, Sharma P, Gunaratne GH
published in: Chaos (Woodbury, N.Y.)
information resource reference: Creating perfectly ordered quantum dot arrays via self-assembly. Chaos. 2009 Sep; 19(3):033141.
journal title abbreviation: Chaos
publication date: 2009-09-01T00:00:00
year: 2009
type: Academic Article
type: Article
type: Document
type: Information Resource

Nanostructures with long-range order in monolayer self-assembly.
PubMed Identifier: 18850882
author list: Shi F, Sharma P, Kouri DJ, Hussain F, Gunaratne GH
published in: Physical review. E, Statistical, nonlinear, and soft matter physics
information resource reference: Nanostructures with long-range order in monolayer self-assembly. Phys Rev E Stat Nonlin Soft Matter Phys. 2008 Aug; 78(2 Pt 2):025203.
journal title abbreviation: Phys Rev E Stat Nonlin Soft Matter Phys
publication date: 2008-08-19T00:00:00
year: 2008
type: Academic Article
type: Article
type: Document
type: Information Resource

A method for vibrational assessment of cortical bone.
PubMed Identifier: 17014207
author list: Song Y, Gunaratne GH
published in: Chaos (Woodbury, N.Y.)
information resource reference: A method for vibrational assessment of cortical bone. Chaos. 2006 Sep; 16(3):033102.
journal title abbreviation: Chaos
publication date: 2006-09-01T00:00:00
year: 2006
type: Academic Article
type: Article
type: Document
type: Information Resource

Set of measures to analyze the dynamics of nonequilibrium structures.
PubMed Identifier: 15903477
author list: Nathan G, Gunaratne G
published in: Physical review. E, Statistical, nonlinear, and soft matter physics
information resource reference: Set of measures to analyze the dynamics of nonequilibrium structures. Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Mar; 71(3 Pt 2A):035101.
journal title abbreviation: Phys Rev E Stat Nonlin Soft Matter Phys
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A study of age-related architectural changes that are most damaging to bones.
PubMed Identifier: 15377523
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An expression relating breaking stress and density of trabecular bone.
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Estimating the strength of bone using linear response.
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